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XIE LAB @ UCI

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  1. NoduleNet NoduleNet Public

    [MICCAI' 19] NoduleNet: Decoupled False Positive Reduction for Pulmonary Nodule Detection and Segmentation

    Python 182 57

  2. DanQ DanQ Public

    A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences

    Groff 155 74

  3. DeepLung DeepLung Public

    WACV18 paper "DeepLung: Deep 3D Dual Path Nets for Automated Pulmonary Nodule Detection and Classification"

    Python 149 54

  4. D-GEX D-GEX Public

    Deep learning for gene expression inference

    Python 146 61

  5. UaNet UaNet Public

    Jupyter Notebook 58 17

  6. UFold UFold Public

    Python 56 26

Repositories

Showing 10 of 38 repositories
  • EpiOut Public

    A statistical method to detect, analyze and visualize aberrations in chromatin accessibility (ATAC-seq, DNase-Seq) and quantify its effect on gene expression.

    uci-cbcl/EpiOut’s past year of commit activity
    Python 2 0 1 0 Updated Mar 6, 2024
  • UFold Public
    uci-cbcl/UFold’s past year of commit activity
    Python 56 MIT 26 24 0 Updated Nov 27, 2023
  • BioML Public
    uci-cbcl/BioML’s past year of commit activity
    5 MIT 2 0 1 Updated Feb 15, 2023
  • scFAN Public
    uci-cbcl/scFAN’s past year of commit activity
    Python 3 MIT 1 0 0 Updated Oct 14, 2022
  • SAILERX Public
    uci-cbcl/SAILERX’s past year of commit activity
    Jupyter Notebook 3 0 1 0 Updated Jul 3, 2022
  • Video-Pre-Training Public Forked from openai/Video-Pre-Training

    Video PreTraining (VPT): Learning to Act by Watching Unlabeled Online Videos

    uci-cbcl/Video-Pre-Training’s past year of commit activity
    Python 0 MIT 141 0 0 Updated Jun 25, 2022
  • RP-Net Public

    Code for Recurrent Mask Refinement for Few-Shot Medical Image Segmentation (ICCV 2021).

    uci-cbcl/RP-Net’s past year of commit activity
    Python 55 9 8 0 Updated Aug 28, 2021
  • SAILER Public
    uci-cbcl/SAILER’s past year of commit activity
    Jupyter Notebook 5 MIT 3 1 0 Updated Jul 27, 2021
  • NoduleNet Public

    [MICCAI' 19] NoduleNet: Decoupled False Positive Reduction for Pulmonary Nodule Detection and Segmentation

    uci-cbcl/NoduleNet’s past year of commit activity
    Python 182 57 22 0 Updated Jun 24, 2020
  • FactorNet Public

    A deep learning package for predicting TF binding

    uci-cbcl/FactorNet’s past year of commit activity
    Python 41 MIT 13 3 0 Updated Jan 23, 2020
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