stuart-lab / signac
R toolkit for the analysis of single-cell chromatin data
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R toolkit for the analysis of single-cell chromatin data
R toolkit for single cell genomics
Repository for Programming Assignment 2 for R Programming on Coursera
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
tools for the analysis of color data in R
Enhancing {ggplot2} plots with statistical analysis 📊📣
Inferring CNV from Single-Cell RNA-Seq
ArchR : Analysis of Regulatory Chromatin in R (www.ArchRProject.com)
Easy interactive web applications with R
Interfaces for HDF5-based Single Cell File Formats
R package for community ecologists: popular ordination methods, ecological null models & diversity analysis
📊 A universal enrichment tool for interpreting omics data
renv: Project environments for R.
Accurate sample inference from amplicon data with single nucleotide resolution