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A set of tools for fitting single- or multi-compartment neuron models parameters, using NSGA2 or Krayzman's dynamically weighted multi-objective optimization

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A set of tools for fitting single- or multi-compartment neuron models parameters, using NSGA2 or Krayzman's dynamically weighted multi-objective optimization

Scripts, templates, and helpers to fit neuron model

├── README.md This file
├── pyneuronautofit module with extension of inspyred
│   ├── autofit.py
│   ├── evaluator.py evaluates a model
│   ├── fitter.py main script for fitting
│   ├── init.py
│   ├── main.py -> fitter.py just link for python -m pyneuronautofit
│   └── runandtest.py runs and tests a model can be call independently
├── scripts directory with useful scripts
│   ├── recovery-archive.sh recover archive if run was aborted
│   └── unique-in-ArXive.py collects only unique models
└── templates
└── project.py project file with all settings

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A set of tools for fitting single- or multi-compartment neuron models parameters, using NSGA2 or Krayzman's dynamically weighted multi-objective optimization

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