A set of tools for fitting single- or multi-compartment neuron models parameters, using NSGA2 or Krayzman's dynamically weighted multi-objective optimization
├── README.md | This file |
├── pyneuronautofit | module with extension of inspyred |
│ ├── autofit.py | |
│ ├── evaluator.py | evaluates a model |
│ ├── fitter.py | main script for fitting |
│ ├── init.py | |
│ ├── main.py -> fitter.py | just link for python -m pyneuronautofit |
│ └── runandtest.py | runs and tests a model can be call independently |
├── scripts | directory with useful scripts |
│ ├── recovery-archive.sh | recover archive if run was aborted |
│ └── unique-in-ArXive.py | collects only unique models |
└── templates | |
└── project.py | project file with all settings |