A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosine reports)
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Updated
Oct 10, 2023 - R
A R package and executable for the preprocessing, statistical analysis, and downstream testing and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosine reports)
AnaLysis routines for ePigenomicS data - 🏫 Bioconductor project
TFregulomeR reveals transcription factors’ context-specific features and functions
R package to impute methylation within WGBS using machine learning
An R package for weighted region comethylation network analysis
A pipeline to identify differentially-methylated regions from whole-genome bisulfite sequencing data
Analysis scripts for identification and visualization of Wilson disease-associated DNA methylation changes in human liver and blood
TFregulomeR reveals transcription factors’ context-specific features and functions
A Bioconductor ExperimentHub data package for flow sorted purified whole blood cell types measured using DNA methylation on WGBS platform from BLUEPRINT
Analyses for the manuscript "Prenatal PCB exposure alters a shared neurodevelopmental DNA methylation profile in mouse placenta and fetal brain".
Analysis of DNA methylation and gene expression for thioredoxin system genes in Wilson disease
Analysis of DNA methylation data by whole-genome bisulfite sequencing in umbilical cord blood from ASD and TD subjects in the MARBLES and EARLI studies
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