biowdl / germline-DNA Star 23 Code Issues Pull requests A BioWDL variantcalling pipeline for germline DNA data. Starting with FASTQ files to produce VCF files. Category:Multi-Sample pipeline somatic-variants wdl structural-variation germline-variants variantcalling multisample gatk4 gatk-bestpractices Updated May 4, 2023 WDL
biowdl / somatic-variantcalling Star 8 Code Issues Pull requests A pipeline for somatic variantcalling. Category:Single-Sample pipeline wdl variantcalling Updated Aug 22, 2022 WDL
jppmatos / vcall Star 1 Code Issues Pull requests variantcalling docker snakemake pipeline variantcalling Updated Oct 1, 2019 Dockerfile
amelgh / DNASeq-VariantCalling Star 1 Code Issues Pull requests mapping dnaseq qc variantcalling Updated May 30, 2018 Shell