PASSIONLab / BELLA Star 48 Code Issues Pull requests BELLA: a Computationally-Efficient and Highly-Accurate Long-Read to Long-Read Aligner and Overlapper matrix-multiplication long-read read-aligners spgemm genome-alignment overlapper pacbio-aligner longread-aligner Updated May 16, 2022 C++
PASSIONLab / ELBA Star 14 Code Issues Pull requests Parallel String Graph Construction, Transitive Reduction, and Contig Generation for De Novo Genome Assembly genome hpc overlapping genome-assembly hpc-applications kmer-counting longread spgemm longread-aligner combblas Updated Jun 11, 2024 C++
lorentzbf / OpSparse Star 11 Code Issues Pull requests Source code of the paper "OpSparse: a Highly Optimized Framework for Sparse General Matrix Multiplication on GPUs" gpu cuda spgemm Updated Aug 23, 2022 Cuda
pavlidic / Binary-SpGEMM Star 3 Code Issues Pull requests An MPI+OpenMP hybrid implementation of Gustavson's Sparse Matrix Multiplication for Boolean CSR matrices openmp mpi matrix-multiplication sparse-matrix spgemm Updated Oct 18, 2021 C
Kxzuir / SpGEMM_sc Star 1 Code Issues Pull requests SpGEMM on NVIDIA GPU cuda spgemm Updated Jul 15, 2018 Cuda