nuno-agostinho / psichomics Star 34 Code Issues Pull requests Discussions Interactive R package to quantify, analyse and visualise alternative splicing tcga gene-expression bioconductor alternative-splicing gtex survival splicing-quantification data-analyses differential-splicing-analysis rna-seq-data sra differential-gene-expression vast-tools recount2 Updated Jul 22, 2024 R
LieberInstitute / megadepth Star 11 Code Issues Pull requests R interface to megadepth: BigWig and BAM related utilities rstats bigwig bam recount2 megadepth recount3 daspter Updated May 3, 2024 R
LieberInstitute / recountWorkshop2020 Star 8 Code Issues Pull requests BioC2020 workshop: Human RNA-seq data from recount2 and related packages workshop rstats bioconductor derfinder recount recount2 genomicstate bioc2020 recount-brain Updated Jul 27, 2020 R
LieberInstitute / marchionni_projects Star 3 Code Issues Pull requests Collaboration with Luigi Marchionni (JHU) and RIKEN with recount2 data rstats biorxiv recount lncrna fantom fantom5 recount2 fantom6 Updated Nov 5, 2019 Shell
LieberInstitute / recount3-docs Star 2 Code Issues Pull requests Documentation for all things related to `recount3` human mouse rstats bioconductor rnaseq recount hg38 recount2 mm10 recount3 Updated Jan 11, 2023 R
lcolladotor / recount-brain-bog19 Star 0 Code Issues Pull requests Poster for Biology of Genomes 2019 (#bog19) on recount-brain sample metadata public poster curated tcga human rnaseq gtex reproducibility brain recount sra recount2 bog19 Updated Aug 23, 2019 HTML