CNAG-Biomedical-Informatics / convert-pheno Star 9 Code Issues Pull requests A software toolkit for the interconversion of standard data models for phenotypic data csv convert biomedical-informatics ehr beacon health-data cdisc redcap bff omop pxf ehr-phenotyping phenopacket ehr-data omop-cdm cdisc-odm beacon-v2 phenopackets-v2 cnag convert-pheno Updated Jul 24, 2024 Perl
EGA-archive / beacon2-ri-tools Star 7 Code Issues Pull requests Beacon v2 Reference Implementation (Data ingestion tools) bioinformatics mongodb genomics phenotypic reference-implementation bff phenopacket ega-archive beacon-v2 beacon-friendly-format Updated Aug 8, 2023 Perl
phenopackets / omop-exporter Star 2 Code Issues Pull requests Export Phenopackets from OMOP omop phenopackets phenopacket omop-cdm-database Updated Nov 11, 2021 Java
mrueda / RD-Connect_to_beaconv2 Star 0 Code Issues Pull requests Scripts to convert RD-Connect data to Beacon v2 bioinformatics bff phenopacket rd-connect beaconv2 Updated May 13, 2022 Shell