OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities, research establishments and industry in Europe and the USA, OME has over 20 active researchers with strong links to the microscopy community. Funded …

A module with convenience functions for writing Python code that interacts with OMERO.

Browse your OMERO database from within napari.

OMERO Docker compose example

Sphinx-based documentation for the Open Microscopy Environment

Python project containing Ice remoting code for OMERO

An OMERO.web app allowing to view images

Continuous integration tool for OME projects

Experimental micro-service for implementing the Zarr spec over HTTP

Django-based OMERO.web client

An OMERO CLI plugin for creating transfer packets between OMERO servers.

An OMERO.web app for creating Figures from images in OMERO

OMERO.server production docker image

BIOMERO - A python library for easy connecting between OMERO (jobs) and a Slurm cluster

Core OMERO Scripts

Examples playbooks for installing OMERO with Ansible and Docker

Plugins for OMERO

Maven project to easily connect to OMERO.

A cross platform version of Bio library & program. Bio is a library & program for annotating, & editing various microscopy imaging formats using Bioformats supported images. including whole slide, pyramidal & series.