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nucmer

Here are 4 public repositories matching this topic...

fmalmeida / plot_nucmer

A simple script to run an alignment with nucmer and visualise its results.

r plot conda whole-genome-alignment nucmer circular-visualization ggbio

Updated Apr 17, 2023
Shell

Juke34 / AliNe

Nextflow Alignment Pipeline

nextflow star hisat2 bwa bowtie2 minimap2 nucmer graphmap2

Updated Oct 21, 2024
Nextflow

alipirani88 / find_hgt_pipeline

compare multiple fasta files using nucmer and extract aligned fragments

bioinformatics hgt recombination nucmer

Updated Sep 27, 2018
Python

ViktorKostin / delta-nucmer-converter-to-bam

Converter Nucmer delta to bam

converter delta bam mummer nucmer mummer4

Updated Jul 13, 2021
Python

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