NicheNet: predict active ligand-target links between interacting cells

Social Network Analysis and STEM Education is designed to prepare researchers to apply network analysis in order to better understand and improve teaching and learning.

A collection of Poisson lognormal models for multivariate count data analysis

A Python package for General Graphical Lasso computation

Context specific and dynamic gene regulatory network reconstruction and analysis

Algorithms for quantifying associations, independence testing and causal inference from data.

Cross-platform library for network interface and gateway. Written in Rust.

REGAIN (Regularised Graphical Inference)

Network inference by fusing data from diverse distributions

Algorithm for Revealing Network Interactions (ARNI) from nonlinear collective dynamics

A sample repo to help you intercept network with Selenium Java on LambdaTest cloud. Run your Java Selenium tests on LambdaTest platform.

A prior-based integrative framework for functional transcriptional regulatory network inference (Fotuhi Siahpirani & Roy, Nucleic Acids Research 2017)

SINCERITIES is a tool for inferring gene regulatory networks from time-stamped cross-sectional single cell transcriptional expression profiles.

An ongoing curated collection of awesome software, libraries, frameworks, talks & videos, best practices, learning tutorials and important practical resources about networking in cybersecurity

Fast Inference of Networks from Directed Regulations

Dashboard for the Inference and Analysis of Networks from Expression data

R package for inference in Bayesian networks.

Hashing-based network discovery from time series

Code used for the manuscript 'Network reconstruction for trans acting genetic loci using multi-omics data and prior information' by Hawe et al., 2022 in Genome Medicine

Network inference for gene expression using gradient matching. Final research project as part of the MSc in Bioinformatics and Theorectical Systems Biology at Imperial College London 2016/2017.