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namd

Here are 4 public repositories matching this topic...

cameronabrams / psfgen

TcL/VMD/psfgen/bash scripts for generating MD systems for use with NAMD

python c bash pdb tcl vmd swig charmm namd psfgen

Updated Mar 13, 2024
Tcl

Sarah-Hesham-2022 / BioPhysics-Molecular-Dynamics-Simulation

Using VMD and NAMD for molecular dynamics simulation of protein PDB files.

bioinformatics programming proteins structural-biology vmd molecular-dynamics-simulation problem-solving namd biophysics trajectory structural-bioinformatics pdb-files visulaization tcl-tk waterbox force-filed nanoscale-molecular-dynamics visualization-molecular-dynamics

Updated Feb 6, 2023
Tcl

jjti / tubulin-in-an-EEF

study of external electric fields' effects on the tubulin dimer via MD

research simulation namd

Updated Dec 3, 2018
Tcl

JonathanHungerland / NAMD_AutoConf

Bash-based scripts to allow MD simulations with multiple stages using a single major configuration file.

molecular-dynamics namd biophysics

Updated Feb 23, 2024
Tcl

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