Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)
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Updated
Jul 24, 2024 - C
Algorithm for ultra-scale multiple sequence alignments (3M protein sequences in 5 minutes and 24 GB of RAM)
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain
TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain
abPOA: an SIMD-based C library for fast partial order alignment using adaptive band
An extension to the wavefront algorithm that generalizes it to work on directed acyclic sequence graphs
🧬 Alinhamento Múltiplo de sequências feito em C, construído na matéria de Estrutura de Dados. 📚
TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain
A fast multiple sequence alignment program.
ALPHAMALIG(ALPHAbet Multiple ALIGnment)
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