Medical imaging toolkit for deep learning
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Updated
Jul 7, 2024 - Python
Medical imaging toolkit for deep learning
[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy
The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.
[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification
Official Pytorch Code for "Medical Transformer: Gated Axial-Attention for Medical Image Segmentation" - MICCAI 2021
Automated lung segmentation in CT
A PyTorch Computer Vision (CV) module library for building n-D networks flexibly ~
Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.
Knowledge-Aware machine LEarning (KALE): accessible machine learning from multiple sources for interdisciplinary research, part of the 🔥PyTorch ecosystem. ⭐ Star to support our work!
A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning
Tensorflow implementation of our paper: Few-shot 3D Multi-modal Medical Image Segmentation using Generative Adversarial Learning
Computational Pathology Toolbox developed by TIA Centre, University of Warwick.
[MICCAI 2023] MedNeXt is a fully ConvNeXt architecture for 3D medical image segmentation.
[IEEE Transactions on Medical Imaging/TMI] This repo is the official implementation of "LViT: Language meets Vision Transformer in Medical Image Segmentation"
Multi-Planar UNet for autonomous segmentation of 3D medical images
Fully automatic brain tumour segmentation using Deep 3-D convolutional neural networks
Official website for "Video Polyp Segmentation: A Deep Learning Perspective (MIR 2022)"
This repository contains the code of LiviaNET, a 3D fully convolutional neural network that was employed in our work: "3D fully convolutional networks for subcortical segmentation in MRI: A large-scale study"
[IEEE JBHI] Reinventing 2D Convolutions for 3D Images - 1 line of code to convert pretrained 2D models to 3D!
COVID deterioration prediction based on chest X-ray radiographs via MoCo-trained image representations
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