Im Datensatz "Laborbestätigte Influenzafälle in Deutschland" werden die wöchentlichen Fallzahlen und Inzidenzen (Fälle pro 100.000 Personen) der nach den Vorgaben des Infektionsschutzgesetzes (IfSG) von den Gesundheitsämtern in Deutschland an die zuständigen Landesbehördne und das Robert Koch-Institut (RKI) übermittelten laborbestätigt...

The Flexible Epidemic Modeling Pipeline

Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement

INDIflueDB is influenza-HumanGenes-Drugs Interaction Database and Graph Network Analysis

Find complete diRNA and vRNA influenza reads ids in long reads. Use something like fqGetIds or seqkit to extract reads by read ids.

Large-Scale Computational Modeling of H5 Influenza Variants Against HA1-Neutralizing Antibodies

This project analyzes the weekly data on Influenza Type A and Type B cases in the US for the period 2023-24.

Access the GISAID Flu database using Python

vSNP -- validate SNPs

Flu clade and mutation frequencies

The mathematical modeling of the optimal strategy for influenza vaccination was studied using a transmission dynamics model that considered population movement, province, and age group

Website for the Flexible Epidemic Modeling Pipeline

Gene and Primer Sequence Analysis for SARS-CoV-2, EGFR(Non Small Lung Cancer Cell), Influenza DNAs ### How can I check my Oligo primers to ensure there are no significant primer design issues? - The difference between melting temperatures (Tm) of the primers should be less than 5°C. - The GC content should be between 35-80% or equivalent to the …

The Moving Epidemic Method R Package

NGS pipeline for influenza virus libraries

Pipeline for analyses of multiple pathogens, like SARS-CoV-2 with positivity rate analyses

Workflows and scripts for the assembly and analysis of influenza whole genome amplicon sequencing.

Integrating genotypes and phenotypes improves long-term forecasts of seasonal influenza A/H3N2 evolution

linfluencer degrees

MPH Capstone Data Management & Analysis