Code to reproduce analyses of mouse cortical gradients
-
Updated
Feb 27, 2019 - MATLAB
Code to reproduce analyses of mouse cortical gradients
An R-shiny package to analyse and visualise fungal gene expression data
Workflow for retrieving spatial gene-expression data from the Allen Institute's Mouse Brain Atlas
Fit your oversized data.frame to your console width.
A biclustering library with datasets, evaluation measures and a benchmarking framework
Agglomerative based clustering on gene expression dataset
DPre is a bioinformatic tool that enables the user to explore cell type conversion/ differentiation experiments. DPre may take the expression or the differentially regulated genes of the samples to rate transcriptional similarity with a reference dataset, the targets.
The Cancer Genome Atlas datbase | Cancer Classification | Deep Learning | CNN
An interactive Streamlit app for processing and visualizing GEO data from NCBI's Gene Expression Omnibus.
Predict the samplesizes for certain errorrates for statistical classifiers
A list of publicly available Microarray Gene Expression datasets with proper attribution and associated toolkits.
This is the R code to extract Gene Expression Profiles of particular genes from GEO (Gene Expression Omnibus) datasets.
Metabolic subtyping of tumors from gene expression data
HRD200: Machine learning model to predict patient HRD status using gene expression data
CocoTF: a workflow to identify context specific co-occurring TF motifs using bedtools, Homer and R packages.
Implementation code for evaluating COMET approach on various simulation datasets
Repository of my internship in the RDDS lab of the University of Trento
Add a description, image, and links to the geneexpression topic page so that developers can more easily learn about it.
To associate your repository with the geneexpression topic, visit your repo's landing page and select "manage topics."