geneexpression
Here are 31 public repositories matching this topic...
Code to reproduce analyses of mouse cortical gradients
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Feb 27, 2019 - MATLAB
DPre is a bioinformatic tool that enables the user to explore cell type conversion/ differentiation experiments. DPre may take the expression or the differentially regulated genes of the samples to rate transcriptional similarity with a reference dataset, the targets.
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Oct 20, 2019 - Python
Fit your oversized data.frame to your console width.
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Jul 15, 2020 - R
A list of publicly available Microarray Gene Expression datasets with proper attribution and associated toolkits.
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Jul 28, 2020 - Python
The Cancer Genome Atlas datbase | Cancer Classification | Deep Learning | CNN
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Sep 4, 2020 - Jupyter Notebook
PCA: Exploring transcriptome-wide changes using python (pandas/scikit-learn/matplotlib) 🧬 💻 👩🔬 🖥️
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Feb 3, 2021 - Jupyter Notebook
Implementation of SRIQ clustering
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Dec 11, 2021 - Jupyter Notebook
Differential expression analysis using R 🧬
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Mar 16, 2022 - R
Shiny app that recopilates all gene expression of zebra fish and informs about the tissue and developmental stage in which the gene is expressed.
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Mar 20, 2022 - R
Workflow for retrieving spatial gene-expression data from the Allen Institute's Mouse Brain Atlas
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Apr 20, 2022 - MATLAB
A biclustering library with datasets, evaluation measures and a benchmarking framework
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Jun 20, 2022 - Python
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Aug 15, 2022 - MATLAB
Predict the samplesizes for certain errorrates for statistical classifiers
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Nov 19, 2022 - R
Agglomerative based clustering on gene expression dataset
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Mar 14, 2023 - Jupyter Notebook
CocoTF: a workflow to identify context specific co-occurring TF motifs using bedtools, Homer and R packages.
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Jun 2, 2023 - Shell
An interactive Streamlit app for processing and visualizing GEO data from NCBI's Gene Expression Omnibus.
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Jun 12, 2023 - Python
A workflow to understand the changes in expression levels of epithelial cells in smokers.
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Jul 30, 2023 - R
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