Russel88 / DAtest Star 48 Code Issues Pull requests Compare different differential abundance and expression methods metagenomics rnaseq auc proteomics metabolomics microbiome false-positive-control differential-expression 16s otu marker-gene-analysis relative-abundances compare-methods differential-abundance-methods Updated Mar 8, 2022 R
aametwally / MetaLonDA Star 14 Code Issues Pull requests METAgenomic LONgitudinal Differential Abundance method metagenomics microbiome longitudinal-studies negative-binomial-distribution differential-abundance-methods smoothing-splines Updated Dec 17, 2019 R
himelmallick / BenchmarkMicrobiome Star 7 Code Issues Pull requests Large-scale Benchmarking of Microbial Multivariable Association Methods benchmarking metagenomics repeated-measures microbiome false-discovery-rate differential-abundance-methods synthetic-dataset-generation biobakery differential-abundance-analysis multiple-covariates Updated Feb 2, 2021 R
mcalgaro93 / benchdamic Star 6 Code Issues Pull requests Benchmark of differential abundance methods on microbiome data benchmark metagenomics microbiome differential-abundance-methods Updated Mar 7, 2024 R