A whole genome bisulfite sequencing (WGBS) pipeline for the alignment and QC of DNA methylation that goes from from raw reads (FastQ) to a CpG count matrix (Bismark cytosine reports)
bioinformatics
slurm
alignment
dna-methylation
wgbs
cpg
whole-genome-bisulfite-sequencing
bismark-cytosine-report
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Updated
Mar 28, 2022 - Shell