V-pipe is a pipeline designed for analysing NGS data of short viral genomes
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Updated
Jul 6, 2024 - Jupyter Notebook
V-pipe is a pipeline designed for analysing NGS data of short viral genomes
EDAM is an ontology of bioscientific data analysis and data management. EDAM concentrates on topics, operations, types of data, and data formats related to analysis, modelling, optimisation, and data life-cycle in biosciences, and in other research and science-based applications.
Issue tracker, technical wiki, and example markup
Python library for RO-Crate
This repository is meant for the participants of the BioHackathon hosted in Barcelona in Nov 2020 to share ideas, create issues, manage projects, publish materials, create code, etc.
Files for the Bioschemas website.
Fork of Galaxy (https://galaxyproject.org/) attempting to implement the CWL spec.
Epidemiology and monitoring ontology for COVID-19
Adaptors for content exchange between bio.tools and community projects.
Handlegraph RDF writers in java for working with variation graph genome data.
Make rs-handlegraph available for use in other languages by generating C header file and a simple lib
Join genomic variation graphs with public data or internal medical data e.g. FHIR. by having a FAIR data access, using W3C sparql as a standard protocol.
Implementation of the 3D-Beacons client (local 3D model server)
A VSM-dictionary that communicates with PubDictionaries REST API
BioHackathon project to define and follow up BioHackathon projects
Handlegraph based GFA(1+2) parsers in java for working with variation graph genome data.
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