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vault.sh Public
An interactive bash script that simplifies the management of gpg encrypted files
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nanocompore Public
RNA modifications detection from Nanopore dRNA-Seq data
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nanocompore_pipeline Public
Nextflow pipeline for nanocompore analysis
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vim-templates Public
Forked from tibabit/vim-templatescreate files from templates
Vim Script MIT License UpdatedDec 6, 2022 -
nanocompore_paper_analyses Public
Analyses performed for the nanocompore paper
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poreplex Public
Forked from hyeshik/poreplexA versatile sequenced read processor for nanopore direct RNA sequencing
Python Other UpdatedMay 12, 2021 -
singularity Public
Forked from a-slide/singularityRepository with my singularity recipes hosted at Singularity Hub
Python MIT License UpdatedFeb 18, 2021 -
pinfish Public
Forked from nanoporetech/pinfishTools to annotate genomes using long read transcriptomics data
Go Other UpdatedApr 21, 2020 -
pubmed_parser Public
Forked from titipata/pubmed_parser📋 A Python Parser for Pubmed Open-Access XML Subset and MEDLINE XML Dataset
Python MIT License UpdatedJan 27, 2020 -
bedparse Public
Python module and CLI tool to perform operations on BED files
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pycoqc_pipeline Public
Nextflow pipeline that runs pycoQC on Guppy output
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altamisa Public
Forked from bihealth/altamisaAlternative Python API for accessing ISA-tab files
Python MIT License UpdatedAug 6, 2019 -
bioconda-recipes Public
Forked from bioconda/bioconda-recipesConda recipes for the bioconda channel.
Shell UpdatedMay 15, 2019 -
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bioinformatics Public
Forked from pjotrp/bioinformaticsTools for bioinformatics
1 UpdatedFeb 11, 2019 -
tapRNAs Public
Pipeline for the identification of Topological Anchor Point RNAs (tapRNAs)
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NanopolishComp Public
Forked from a-slide/NanopolishCompPython package for upstream preprocessing and downstream analysis of nanopolish
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simple-java-maven-app Public
Forked from jenkins-docs/simple-java-maven-appFor an introductory tutorial on how to use Jenkins to build a simple Java application with Maven.
Java UpdatedJul 21, 2018 -
ggheatmap Public
Generate pretty ggplot2 heatmaps with row and column dendrograms
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intim Public
Forked from iago-lito/intimInteractively interface Vim with interpreters
Vim Script GNU General Public License v3.0 UpdatedApr 13, 2018 -
chipseq_pipeline Public
Forked from kundajelab/chipseq_pipelineAQUAS TF and histone ChIP-seq pipeline
Java BSD 3-Clause "New" or "Revised" License UpdatedFeb 7, 2018 -
superstruct Public
Forked from ianstormtaylor/superstructA simple and composable way to validate data in Javascript.
JavaScript MIT License UpdatedDec 5, 2017 -
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notmuch-addrlookup-c Public
Forked from aperezdc/notmuch-addrlookup-cAddress lookup tool for Notmuch in C using GLib and libnotmuch
C UpdatedAug 14, 2017 -
SequenceImp Public
Forked from davis-m/SequenceImpSmall RNA analysis pipeline
Perl Other UpdatedJun 28, 2017 -
debtap Public
Forked from helixarch/debtapA script for converting .deb packages into Arch Linux packages, focused on accuracy
Shell GNU General Public License v2.0 UpdatedMay 24, 2017 -
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rmd2html Public
Workflow that converts Rmd files in a nicely formatted html page using twitter bootstrap
MIT License UpdatedNov 7, 2014
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