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freebayes
freebayes PublicForked from freebayes/freebayes
Bayesian haplotype-based polymorphism discovery and genotyping.
C++ 1
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vcflib
vcflib PublicForked from vcflib/vcflib
a simple C++ library for parsing and manipulating VCF files, + many command-line utilities
C++
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bcftools
bcftools PublicForked from samtools/bcftools
This is the official development repository for BCFtools. To compile, the bcftools+calling branch of htslib is needed: git clone --branch=bcftools+calling git:https://github.com/samtools/htslib.git htslib
C
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picard
picard PublicForked from broadinstitute/picard
A set of tools (in Java) for working with next generation sequencing data in the BAM (http:https://samtools.github.io/hts-specs) format.
Java
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lumpy-sv
lumpy-sv PublicForked from arq5x/lumpy-sv
lumpy: a general probabilistic framework for structural variant discovery
C
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