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- https://scholar.google.com/citations?user=66lj2Z0AAAAJ
- @tanghaibao
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jcvi Public
Python library to facilitate genome assembly, annotation, and comparative genomics
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goatools Public
Python library to handle Gene Ontology (GO) terms
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bio-pipeline Public
My collection of light bioinformatics analysis pipelines for specific tasks
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nannou-playground Public
Animation projects that leverage the excellent nannou library
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pybind11_log Public
A bridge from C++ to Python logging
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allhic Public
Genome scaffolding based on HiC data in heterozygous and high ploidy genomes
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dotfiles Public
bashrc, vimrc, gitconfig and various other configuration files
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Splithunter Public
Identify split reads in given chromosomal regions
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treecut Public
Find nodes in hierarchical clustering that are statistically significant
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quota-alignment Public
Guided synteny alignment between duplicated genomes (within specified quota constraint)
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jcvi-bin Public
Collection of third-party softwares used in jcvi library
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trimReads Public
Utility programs to trim or sort Illumina reads with adapter sequences
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pgdd Public archive
Dynamic contents within the plant genome duplication database
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positional-history Public archive
Internal scripts to run the pipeline to determine the transpositions of A. thaliana genes with respect to multiple outgroups
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mcscan Public archive
Command-line program to wrap dagchainer and combine pairwise results into multi-alignments in column format
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dna-pygments Public archive
Javascript code to highlight features in biological sequences