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@stjudecloud

St. Jude Cloud

A blue sky project created to effectively share data produced at St. Jude Children's Research Hospital with the world.

Popular repositories

  1. oliver oliver Public archive

    An opinionated Cromwell orchestration manager.

    Python 40 3

  2. workflows workflows Public

    Bioinformatics workflows developed for and used on the St. Jude Cloud project.

    WDL 31 9

  3. wdldoc wdldoc Public

    Create WDL documentation using Markdown.

    Python 27 5

  4. ngsderive ngsderive Public

    Forensic analysis tool useful in backwards computing information from next-generation sequencing data.

    Python 11

  5. docs docs Public archive

    Documentation on St. Jude Cloud.

    Shell 7 6

  6. university university Public

    Educational materials for the St. Jude Cloud project.

    JavaScript 4 19

Repositories

Showing 10 of 29 repositories
  • workflows Public

    Bioinformatics workflows developed for and used on the St. Jude Cloud project.

    stjudecloud/workflows’s past year of commit activity
    WDL 31 MIT 9 4 3 Updated Jun 25, 2024
  • wdldoc Public

    Create WDL documentation using Markdown.

    stjudecloud/wdldoc’s past year of commit activity
    Python 27 MIT 5 0 4 Updated Jun 24, 2024
  • ngsderive Public

    Forensic analysis tool useful in backwards computing information from next-generation sequencing data.

    stjudecloud/ngsderive’s past year of commit activity
    Python 11 MIT 0 0 6 Updated Jun 24, 2024
  • university Public

    Educational materials for the St. Jude Cloud project.

    stjudecloud/university’s past year of commit activity
    JavaScript 4 19 1 12 Updated Jun 20, 2024
  • stjudecloud/expression-classification’s past year of commit activity
    Python 2 MIT 0 1 0 Updated Jun 17, 2024
  • cde-transformers Public

    TODO

    stjudecloud/cde-transformers’s past year of commit activity
    PHP 0 0 0 0 Updated May 24, 2024
  • utilities Public

    Utility scripts created for and used on the St. Jude Cloud team.

    stjudecloud/utilities’s past year of commit activity
    Python 0 MIT 0 0 5 Updated Apr 29, 2024
  • rfcs Public

    Request for Comments (RFCs) on the St. Jude Cloud Project.

    stjudecloud/rfcs’s past year of commit activity
    Jupyter Notebook 0 2 0 6 Updated Apr 4, 2024
  • msgenctl Public

    CLI to manage Microsoft Genomics workflows

    stjudecloud/msgenctl’s past year of commit activity
    Go 0 MIT 0 0 0 Updated Feb 16, 2024
  • dx-rnaseq_standard Public

    Monolithic DNAnexus implementation of RNA-Seq V2 pipeline with miniwdl

    stjudecloud/dx-rnaseq_standard’s past year of commit activity
    Shell 0 0 0 0 Updated Feb 9, 2024

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