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Statens Serum Institut

Popular repositories

  1. CD-MRG-metabolomics_summerschool_2023 CD-MRG-metabolomics_summerschool_2023 Public

    This repository contains teaching material for the 3rd International Summer School on Non-Targeted Metabolomics Data Mining for Biomedical Research

    Jupyter Notebook 11 12

  2. serum_readfilter serum_readfilter Public

    Python 7

  3. bifrost bifrost Public

    6 6

  4. SCDB SCDB Public

    R package for maintaining data bases with slowly-changing-dimensions

    R 6 3

  5. miniLIMS miniLIMS Public

    LIMS in development to be used in NGS facility

    Python 5

  6. GenEpi-BioTrain_Virtual_Training_7 GenEpi-BioTrain_Virtual_Training_7 Public

    All data used in the GenEpi-BioTrain Virtual Training 7 session on march 19-20, 2024

    Python 5

Repositories

Showing 10 of 107 repositories
  • sofi_core Public
    ssi-dk/sofi_core’s past year of commit activity
    Python 1 0 4 28 Updated Aug 29, 2024
  • sofi_core_gitops Public

    GitOps configuration for the sofi_core Kubernetes cluster

    ssi-dk/sofi_core_gitops’s past year of commit activity
    0 1 0 0 Updated Aug 27, 2024
  • microbeseq_nbdev_augment Public

    Files to assist in setup of nbdev

    ssi-dk/microbeseq_nbdev_augment’s past year of commit activity
    Jupyter Notebook 0 MIT 1 1 0 Updated Aug 27, 2024
  • bio_api Public

    REST API for triggering bioinformatic calculations from SOFI

    ssi-dk/bio_api’s past year of commit activity
    Python 0 0 0 4 Updated Aug 16, 2024
  • Staphylococcal_nasal_occupancy Public

    R scripts accompanying the manuscript "Staphylococcal occupancy within the human nasal microbiota" (Ingham et al.)

    ssi-dk/Staphylococcal_nasal_occupancy’s past year of commit activity
    0 0 0 0 Updated Aug 9, 2024
  • MicrobeSeq-Denmark Public

    Location for SSI's microbial surveillance pipelines

    ssi-dk/MicrobeSeq-Denmark’s past year of commit activity
    SCSS 0 0 1 0 Updated Aug 9, 2024
  • diseasy Public
    ssi-dk/diseasy’s past year of commit activity
    R 2 0 16 (1 issue needs help) 10 Updated Aug 6, 2024
  • CD-MRG-PlatePlanner Public

    Python package to create multi-well plate layouts for specimen sample data. Automatically distributes quality control samples according to scheme in config file.

    ssi-dk/CD-MRG-PlatePlanner’s past year of commit activity
    Python 2 MIT 1 0 3 Updated Jul 30, 2024
  • diseasystore Public

    R package that provides a feature store tailored towards disease modelling

    ssi-dk/diseasystore’s past year of commit activity
    R 2 GPL-3.0 1 6 (1 issue needs help) 13 Updated Jul 29, 2024
  • AEF-DDF Public
    ssi-dk/AEF-DDF’s past year of commit activity
    R 1 0 0 0 Updated Jul 26, 2024
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