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added github workflows
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spedygiorgio committed Feb 25, 2024
1 parent bc26987 commit 59eb224
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1 change: 1 addition & 0 deletions .Rbuildignore
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Expand Up @@ -7,3 +7,4 @@
^README\.Rmd$
^README-.*\.png$
^LICENSE\.md$
^\.github$
1 change: 1 addition & 0 deletions .github/.gitignore
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*.html
49 changes: 49 additions & 0 deletions .github/workflows/R-CMD-check.yaml
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]

name: R-CMD-check

jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}

name: ${{ matrix.config.os }} (${{ matrix.config.r }})

strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}

env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes

steps:
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck
needs: check

- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
48 changes: 48 additions & 0 deletions .github/workflows/pkgdown.yaml
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]
release:
types: [published]
workflow_dispatch:

name: pkgdown

jobs:
pkgdown:
runs-on: ubuntu-latest
# Only restrict concurrency for non-PR jobs
concurrency:
group: pkgdown-${{ github.event_name != 'pull_request' || github.run_id }}
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
permissions:
contents: write
steps:
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::pkgdown, local::.
needs: website

- name: Build site
run: pkgdown::build_site_github_pages(new_process = FALSE, install = FALSE)
shell: Rscript {0}

- name: Deploy to GitHub pages 🚀
if: github.event_name != 'pull_request'
uses: JamesIves/[email protected]
with:
clean: false
branch: gh-pages
folder: docs
50 changes: 50 additions & 0 deletions .github/workflows/test-coverage.yaml
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master]
pull_request:
branches: [main, master]

name: test-coverage

jobs:
test-coverage:
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

steps:
- uses: actions/checkout@v4

- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::covr
needs: coverage

- name: Test coverage
run: |
covr::codecov(
quiet = FALSE,
clean = FALSE,
install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package")
)
shell: Rscript {0}

- name: Show testthat output
if: always()
run: |
## --------------------------------------------------------------------
find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash

- name: Upload test results
if: failure()
uses: actions/upload-artifact@v4
with:
name: coverage-test-failures
path: ${{ runner.temp }}/package
2 changes: 1 addition & 1 deletion DESCRIPTION
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Expand Up @@ -17,7 +17,7 @@ Description: Classes and methods that allow the user to manage life table,
perform demographic, financial and actuarial mathematics on life contingencies
insurances calculations are contained therein. See Spedicato (2013) <doi:10.18637/jss.v055.i10>.
Depends:
R (>= 4.2.0),
R (>= 4.1.0),
methods
Imports:
parallel,
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1 change: 1 addition & 0 deletions vignettes/compute-detail.Rmd
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Expand Up @@ -3,6 +3,7 @@ title: "Computational details of demographic functions"
author: "C. Dutang and G.A. Spedicato"
date: "`r format(Sys.time(), '%d %B, %Y')`"
output: rmarkdown::html_vignette
bibliography: lifecontingenciesBiblio.bib
vignette: >
%\VignetteIndexEntry{Computational details of demographic functions}
%!\VignetteEncoding{UTF-8}
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4 changes: 3 additions & 1 deletion vignettes/pensionfunding.Rmd
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@@ -1,6 +1,8 @@
---
title: "Pension Funding with lifecontingencies"
author: "Gian Paolo Clemente, Catholic University, Milan"
author:
- name: "Gian Paolo Clemente"
affiliation: Catholic University of Milan
date: "`r format(Sys.time(), '%d %B, %Y')`"
output: rmarkdown::html_vignette
bibliography: lifecontingenciesBiblio.bib
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