A supervised learning model based on Graph Neural Network to predict gene co-expression from chromatin contacts

Snakemake pipeline to analyze transposable element 'omics data.

mulea - an R package for enrichment analysis using various ontologies and empirical false discovery rate

A 'ggplot2' Extension for Consistent Axis Alignment

cython + htslib == fast VCF and BCF processing

Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.

an R/shiny application for creation of Circos plot interactively

Annotation and Ranking of Structural Variation

Mutual nearest neighbor graphs for population structure inference and visualization 🐙

Sampling and inference of genealogies with recombination

Toolkit for evolutionary analyses of linkage groups

rust-based wrapper for SLiM population genetics simulation engine

A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0

Easily construct the ML species tree with single-copy gene shared by different species.

Analysis of large inversions using SNP data

Open-source Windows and Office activator featuring HWID, Ohook, KMS38, and Online KMS activation methods, along with advanced troubleshooting.

TEtrimmer: a novel tool to automate manual curation of transposable elements

CloudFlare free temp domain email 免费收发 临时域名邮箱 支持附件 IMAP SMTP TelegramBot

Python scraper based on AI

Free Introduction to Bash Scripting eBook

Graphical Fragment Assembly (GFA) Format Specification

Extra add-ons that may be useful for people using SLiM, but that are not part of the SLiM project itself

Scripts to analyze data using TreeMix. This pipeline runs TreeMix with bootstrapping, helps choose number of migration events and creates a consensus tree. It plots the maximum likelihood tree with…

Eukaryotic Genome Annotation Pipeline

A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)

Tools for manipulating sequence graphs in the GFA and rGFA formats

Lightweight mosaic/somatic SV caller for long reads (WIP)

A visual no-code/code-free web crawler/spider易采集：一个可视化浏览器自动化测试/数据采集/爬虫软件，可以无代码图形化的设计和执行爬虫任务。别名：ServiceWrapper面向Web应用的智能化服务封装系统。

Tool for plotting sequencing data along genomic coordinates.