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30 Open 350 Closed
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Issues list

Problem with STAR version
#397 opened Jul 10, 2024 by joannaslotaczarny
Calculating TPM or FPKM
#395 opened May 7, 2024 by gevro
BUG
#394 opened Apr 19, 2024 by nhu-github
1
R error during counting step before demultiplexing.
#393 opened Apr 16, 2024 by dfmoralesb
Error in using zumis to analyse transposon
#392 opened Apr 6, 2024 by ROund-code
error in using zUMIs to processing smartseq3 data
#391 opened Feb 23, 2024 by GGboy-Zzz
Cannot get the example data from Google Drive
#390 opened Feb 21, 2024 by RoseMary93
1
Question：How zUMIs detect Barcodes and why the sum of second column in BCstat.txt is not equal to the sum of input reads number？
#389 opened Feb 5, 2024 by bioinfotec
Error with Corrrecting UB tags when working with large sample size
#388 opened Jan 28, 2024 by kvn95ss
The .git/objects/pack file is so huge
#386 opened Jan 16, 2024 by bioinfotec
1
Issues while starting zUMIs
#383 opened Dec 13, 2023 by Thomas-Michiels
1
Question about put pattern and internal reads together to analyse
#382 opened Dec 4, 2023 by Dkaaaaa
3
Question - about the result of kept_barcodes_binned.txt.BCUMIstats.txt
#381 opened Nov 20, 2023 by Dkaaaaa
3
Using demultiplexed BAM files output from zUMIs with Picard Tools
#380 opened Nov 9, 2023 by seifudd
1
Failed to open filtered.tagged.unmapped.bam
#379 opened Oct 30, 2023 by aduntslusine
1
Mapping error at .tmpMap//tmp.test2.*.SJ.out.tab'
#378 opened Oct 26, 2023 by aliibarry
5
Error in alldt[[i]][[2]] : subscript out of bounds
#377 opened Oct 21, 2023 by MohamedAbdalfatah
3
function 'strsplit': object 'GE' not found
#375 opened Sep 30, 2023 by yangmean
4
How to only demultiplex raw reads (not mapped reads) using zUMIs
#374 opened Sep 26, 2023 by ytang0831
3
additional sequences
#373 opened Sep 15, 2023 by ljy-sys
4
Error in the counting stage
#370 opened Aug 31, 2023 by russellxie
1
Starting zUMIs
#369 opened Aug 23, 2023 by ISIDORAPA
1
[Feature Request] Adding PIPSeq barcode detection
#366 opened Aug 9, 2023 by mbassalbioinformatics
1
EXITING because of fatal PARAMETERS error: sjdbOverhang <=0 while junctions are inserted on the fly with --sjdbFileChrStartEnd or/and --sjdbGTFfile
#365 opened Jul 11, 2023 by hxyyxh
1
BUG: segmentation fault during STAR mapping
#363 opened May 15, 2023 by LJK1991
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