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Achievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

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@genes-and-id

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  • sclipman Public

    Config files for my GitHub profile.

    config github-config
    Updated Aug 26, 2024

  • Anelloflow Public

    Bioinformatics pipeline for detecting anelloviruses present in samples using our metagenomic RCA ONT protocol

    Shell 1 Updated Apr 4, 2024

  • SociospatialNet-Incidence Public

    This repository hosts code for an interactive sociospatial network visualization of HIV incidence among a cohort of PWID in New Delhi, India

    JavaScript Updated Jun 27, 2022

  • barabasialbert Public

    Forked from sarah37/barabasialbert

    Simulation of a scale-free network using the Barabási-Albert model.

    JavaScript Updated Feb 9, 2022

  • GraphRNN Public

    Forked from snap-stanford/GraphRNN
    Python MIT License Updated Feb 8, 2022

  • sociospatial-baseline Public

    This repository hosts data and code for an interactive sociospatial network visualization of baseline HIV/HCV prevalence among a cohort of people who inject drugs in New Delhi, India. Visit the lin…

    epidemiology network-analysis hiv hcv
    JavaScript MIT License Updated Aug 13, 2021

  • PandemicPulse Public

    Rapid, real-time monitoring of the SARS-CoV-2 pandemic and its impacts

    HTML Updated Jul 16, 2021

  • EPI-ClusT Public

    User-friendly distance-free method for defining clusters from phylogenetic trees

    Python 2 MIT License Updated Dec 16, 2019

  • Phydelity Public

    Forked from alvinxhan/Phydelity

    Inference of putative transmission phylogenetic clusters

    Jupyter Notebook GNU Lesser General Public License v3.0 Updated Jul 30, 2019

  • EV-D68 Public

    Updated Jul 16, 2019

  • vg Public

    Forked from vgteam/vg

    tools for working with genome variation graphs

    C++ Other Updated Jul 11, 2019

  • Phylogeography Public

    This repository hosts code for an animated phylogeographic plot of HCV spread among PWID in India

    JavaScript 1 Updated Jun 27, 2019

  • CoupledMCMC Public

    Forked from nicfel/CoupledMCMC

    Coupled MCMC for Beast2

    Java GNU General Public License v3.0 Updated May 29, 2019

  • augur Public

    Forked from nextstrain/augur

    Pipeline components for real-time virus analysis

    Python GNU Affero General Public License v3.0 Updated May 23, 2019

  • shiver Public

    Forked from ChrisHIV/shiver

    Sequences from HIV Easily Reconstructed

    Python GNU General Public License v3.0 Updated May 15, 2019

  • hyphy Public

    Forked from veg/hyphy

    HyPhy: Hypothesis testing using Phylogenies

    HyPhy Other Updated May 10, 2019

  • Markdown Public

    Forked from adam-p/markdown-here

    Google Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.

    JavaScript MIT License Updated Apr 15, 2019

  • pgeocode Public

    Forked from symerio/pgeocode

    Postal code geocoding and distance calculation

    Python BSD 3-Clause "New" or "Revised" License Updated Apr 7, 2019

  • Authorplea-Filenamer Public

    Python script for automatically prefixing .docx files with the author's last name

    Python GNU General Public License v3.0 Updated Apr 3, 2019

  • NGSTools Public

    Forked from Czh3/NGSTools

    Next-Generation Sequencing(NGS) toolkits.

    Python Updated May 5, 2016

  • gephi-plugins Public

    Forked from oxfordinternetinstitute/gephi-plugins

    Switch to the sigmaexporter-plugin branch (https://github.com/oxfordinternetinstitute/gephi-plugins/tree/sigmaexporter-plugin/modules/sigmaExporter) or jsonexporter-plugin branch (https://github.co…

    Java Updated Jan 25, 2016