-
Johns Hopkins School of Medicine
- Baltimore, MD, USA
- https://sclipman.com
Highlights
- Pro
-
-
Anelloflow Public
Bioinformatics pipeline for detecting anelloviruses present in samples using our metagenomic RCA ONT protocol
-
SociospatialNet-Incidence Public
This repository hosts code for an interactive sociospatial network visualization of HIV incidence among a cohort of PWID in New Delhi, India
JavaScript UpdatedJun 27, 2022 -
barabasialbert Public
Forked from sarah37/barabasialbertSimulation of a scale-free network using the Barabási-Albert model.
JavaScript UpdatedFeb 9, 2022 -
-
sociospatial-baseline Public
This repository hosts data and code for an interactive sociospatial network visualization of baseline HIV/HCV prevalence among a cohort of people who inject drugs in New Delhi, India. Visit the lin…
JavaScript MIT License UpdatedAug 13, 2021 -
PandemicPulse Public
Rapid, real-time monitoring of the SARS-CoV-2 pandemic and its impacts
HTML UpdatedJul 16, 2021 -
EPI-ClusT Public
User-friendly distance-free method for defining clusters from phylogenetic trees
-
Phydelity Public
Forked from alvinxhan/PhydelityInference of putative transmission phylogenetic clusters
Jupyter Notebook GNU Lesser General Public License v3.0 UpdatedJul 30, 2019 -
-
tools for working with genome variation graphs
C++ Other UpdatedJul 11, 2019 -
Phylogeography Public
This repository hosts code for an animated phylogeographic plot of HCV spread among PWID in India
-
CoupledMCMC Public
Forked from nicfel/CoupledMCMCCoupled MCMC for Beast2
Java GNU General Public License v3.0 UpdatedMay 29, 2019 -
augur Public
Forked from nextstrain/augurPipeline components for real-time virus analysis
Python GNU Affero General Public License v3.0 UpdatedMay 23, 2019 -
shiver Public
Forked from ChrisHIV/shiverSequences from HIV Easily Reconstructed
Python GNU General Public License v3.0 UpdatedMay 15, 2019 -
HyPhy: Hypothesis testing using Phylogenies
HyPhy Other UpdatedMay 10, 2019 -
Markdown Public
Forked from adam-p/markdown-hereGoogle Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.
JavaScript MIT License UpdatedApr 15, 2019 -
pgeocode Public
Forked from symerio/pgeocodePostal code geocoding and distance calculation
Python BSD 3-Clause "New" or "Revised" License UpdatedApr 7, 2019 -
Authorplea-Filenamer Public
Python script for automatically prefixing .docx files with the author's last name
Python GNU General Public License v3.0 UpdatedApr 3, 2019 -
NGSTools Public
Forked from Czh3/NGSToolsNext-Generation Sequencing(NGS) toolkits.
Python UpdatedMay 5, 2016 -
gephi-plugins Public
Forked from oxfordinternetinstitute/gephi-pluginsSwitch to the sigmaexporter-plugin branch (https://github.com/oxfordinternetinstitute/gephi-plugins/tree/sigmaexporter-plugin/modules/sigmaExporter) or jsonexporter-plugin branch (https://github.co…
Java UpdatedJan 25, 2016