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Issues: saezlab/liana

LIANA's development continous as LIANA+
#148 opened Apr 29, 2024 by dbdimitrov
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Issues list

Error while running lianabysample
#155 by Samir1703 was closed Jul 2, 2024
1
TypeError: metaclass conflict in liana_tensor_c2c
#152 by rbutleriii was closed May 20, 2024
2
liana_tensor_c2c error: All input columns must be contained in all dataframes included in 'context_dict'
#149 by alvarezprado was closed May 4, 2024
8
Issue with using the example dictionary to do orthology conversion
#146 by XinruSu was closed Apr 16, 2024
Error: object 'homologene_download' is not exported by 'namespace:OmnipathR'
#144 by jjacob12 was closed Apr 7, 2024
3
Running Liana on Mouse single cell
#135 by PolSabt was closed Jan 21, 2024
2
Liana R vs Liana py versions
#134 by KyriakisDimitrios was closed Dec 12, 2023
3
Earlier versions of Liana
#130 by paulyashna was closed Nov 21, 2023
1
Error: All columns in a tibble must be vectors., in liana_tensor_c2c
#128 by jonhsussman was closed Oct 18, 2023
1
Can Liana work on csv files
#125 by Samir1703 was closed Sep 29, 2023
3
Issue in installation
#124 by youngorchuang was closed Nov 3, 2023
1
handling gene symbol
#123 by Erfan1369 was closed Sep 29, 2023
3
Filling of is_directed, is_stimulation, is_inhibition in cellchat_pipe.r
#122 by wjjnnn was closed Sep 29, 2023
1
can Liana works with Seurat V5 assay? question Further information is requested
#119 by jessicaliu70 was closed Sep 29, 2023
@dbdimitrov
1
cytotalk.rank in mean_rank
#118 by auroramaurizio was closed Sep 29, 2023
2
liana_wrap error, please help
#117 by intawat was closed Jun 21, 2023
2
Should idents be broad cell types or well defined subpopulations?
#116 by kaizen89 was closed Jun 22, 2023
3
LIANA for bulk RNA seq with separated cell samples
#115 by ngutrinh was closed May 24, 2023
3
MEBOCOST DB Integration
#114 by relgamal was closed May 23, 2023
2
liana_wrap error!
#113 by achilessss was closed May 22, 2023
Not able to use gpu on HPC
#111 by kaizen89 was closed May 25, 2023
3
Error in liana_tensor_c2c
#110 by BenjaminDEMAILLE was closed Sep 29, 2023
5
Downloading Liana in R
#109 by sakinaamin was closed May 23, 2023
1
Comparing two or three conditions in dot plot.
#108 by viktorzou was closed May 5, 2023
2
Bump up cell2cell version in balisilisk env
#107 by dbdimitrov was closed Nov 3, 2023
@dbdimitrov
ProTip! Exclude everything labeled bug with -label:bug.