-
Notifications
You must be signed in to change notification settings - Fork 115
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Conda package #95
Comments
Hi @Zethson I will have a look into this. |
Is there any update on the conda implementation? |
@ejc043 |
Today I spent 5 hours on the installation of nichenet, conda could help save time for installation. |
This is the code for nichenet installation in conda enviroment: conda install -c conda-forge -c bioconda -c defaults r-essentials r-remotes geos cmake -y |
Yup, same here. Took me 2 days of on and off attempts to get a working conda environment for NicheNet. Love the software though! |
It also take me half day to install this package in micromamba, R4.0.0 can not install successful for that some package rely on R>4.1. My R version is 4.2.3. Here is my successful install: #build a clean environment: #install R-base and packages that can not be installed by devtools::install_github: #run this in R: |
For conda users, and a bit of an update from November 2023 (and after 4 hours of trying??) this works for me:
R
but thanks for the package, it's wonderful :) |
Hi,
would it be possible that you add nichenet to Bioconda?
Thank you very much
The text was updated successfully, but these errors were encountered: