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1. amr_one_health_2021 amr_one_health_2021 Public

   One Health Summer Institute's Introduction to Bioinformatics workshop. Session on Bioinformatics for AMR Research.

   3

2. beebiome-data-portal beebiome-data-portal Public

   Forked from BeeBiome-consortium/beebiome-data-portal

   A resource for scientists and the general public on bee-associated microbes/viruses and their impact on bee health

   Java

3. impact_of_sequencing_depth impact_of_sequencing_depth Public

   Code for data analysis of the paper "Impact of sequencing depth on the characterization of the microbiome and resistome" by Zaheer et al. (2018)

   R 1

4. one_health_continuum one_health_continuum Public

   🐮 💊 🐄 💩 Code for the paper Comparative diversity of microbiomes and resistomes in beef feedlots, downstream environments and urban sewage influent.

   R

5. WGS WGS Public

   Tutorials and resources for bacterial whole genome sequence analysis based on Next Generation Sequencing data

   Python 1

6. enteroComp enteroComp Public

   Analysis of Enterococcus AST profiles and marker genes

   R