FrameDiPT: an SE(3) diffusion model for protein structure inpainting

Predict the structure of immune receptor proteins

Insert NumPy style docstrings in Python functions.

Peptide-MHC I binding affinity prediction

Annotated data.

Statistical Rethinking (2nd ed.) with NumPyro

Natural Gradient Boosting for Probabilistic Prediction

Multivariate imputation and matrix completion algorithms implemented in Python

Tasks Assessing Protein Embeddings (TAPE), a set of five biologically relevant semi-supervised learning tasks spread across different domains of protein biology. (DEPRECATED)

Book about interpretable machine learning

Set up a personal VPN in the cloud

Prelude is an enhanced Emacs 25.1+ distribution that should make your experience with Emacs both more pleasant and more powerful.

Naming and shaming companies who kowtow to Chinese censorship requests

Home Assistant custom component for the Kaiterra's devices

Slic3r with integrated electronics and Nonplanar slicer (see branches)

HungaBunga: Brute-Force all sklearn models with all parameters using .fit .predict!

21st century AD

JupyterLab Top Bar extensions

Mapping out the coarse-grained connectivity structures of complex manifolds.

Java tools for analyzing Drop-seq data

Generic script for the analysis of scRNA-seq data pre-processed using https://github.com/Hoohm/dropSeqPipe.

Population balance analysis

RNA velocity estimation in Python

📚 Parameterize, execute, and analyze notebooks

Jupyter Notebooks as Markdown Documents, Julia, Python or R scripts

Voilà turns Jupyter notebooks into standalone web applications

A general-purpose probabilistic programming system with programmable inference

Accelerating the deduplication and collapsing process for reads with Unique Molecular Identifiers (UMI). Heavily optimized for scalability and orders of magnitude faster than a previous tool.

ripgrep recursively searches directories for a regex pattern while respecting your gitignore

A framework for blind denoising with self-supervision.