Python interface for generating coordinate tables and region labels from statistical MRI images

Package for visualizing brain networks. Creates chord diagrams drawn using matplotlib

Lightweight Python implementation of Normative Modelling

Correcting Covariance Batch Effects (CovBat): Harmonization of mean and covariance for multi-site data

Kalman Filter book using Jupyter Notebook. Focuses on building intuition and experience, not formal proofs. Includes Kalman filters,extended Kalman filters, unscented Kalman filters, particle filte…

Results and plots replications for paper in prediction of Intrinsic Connectivity Networks in task versus resting fMRI

Python implementation of elastic-net regularized generalized linear models

Cortex - Deep learning tools for neuroimaging

Public facing notes page

scikit-learn compatible projects

common data analysis and machine learning tasks using python

Workflows and interfaces for neuroimaging packages

Neuroimaging in Python FMRI analysis package

aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)