UpSet plots from a Shiny app, rendered with Plotly
A very simple Shiny dashboard, illustrating how to make an upset plot from scratch, rendering using the method of Lex, Gehlenborg et al [1]. It's much simpler than their interactive version, but is an improvement on the static plot produce by UpSetR for Shiny purposes. I've build a similar thing into a module in <a href = "https://github.com/pinin4fjords/shinyngs">Shinyngs, but thought someone might find this standalone code useful.
Additional to the traditional UpSet plot based on the areas of Venn/Euler diagrams where items are essentially assigned to the highest order interaction with which they're involved, this plot also allows a display where ALL items matching a given intersection can be included.
This is the 'movies.csv' provided with the UpSetR package.
- Lex and Gehlenborg (2014). Points of view: Sets and intersections. Nature Methods 11, 779 (2014). <a href="http:https://www.nature.com/nmeth/journal/v11/n8/abs/nmeth.3033.html\">http:https://www.nature.com/nmeth/journal/v11/n8/abs/nmeth.3033.html
- Gehlenborg N (2016). UpSetR: A More Scalable Alternative to Venn and Euler Diagrams for Visualizing Intersecting Sets. R package version 1.3.0, <a href="https://CRAN.R-project.org/package=UpSetR\">https://CRAN.R-project.org/package=UpSetR.