Commits

Commits on Mar 18, 2023

Added description of how GE scanner files should be used
nw-duncan
committedMar 18, 2023
Updated load_gep instructions to note that the input filename must not be changed from how it is output from the scanner
nw-duncan
committedMar 18, 2023
Add note about GE support
nw-duncan
committedMar 18, 2023

Commits on Dec 21, 2022

Altered numpy version requirements.
nw-duncan
committedDec 21, 2022

Commits on Dec 20, 2022

Updated additional tests for io.py
nw-duncan
committedDec 20, 2022
Fixed additional tests for io.py
nw-duncan
committedDec 20, 2022
Added additional tests for io.py
nw-duncan
committedDec 20, 2022
Merge branch 'physiopy:master' into test-ge
nw-duncan
committedDec 20, 2022

Commits on Nov 29, 2022

Delete RESPData_epiRT_0509202010_27_51_971

nw-duncan
authored and
smoia
committedNov 29, 2022
Delete PPGData_epiRT_0509202010_27_51_971

nw-duncan
authored and
smoia
committedNov 29, 2022
Fixed problem in physio_obj

nw-duncan
authored and
smoia
committedNov 29, 2022
Updated integration test for GE

nw-duncan
authored and
smoia
committedNov 29, 2022
Updated integration test for GE

nw-duncan
authored and
smoia
committedNov 29, 2022
Updated integration test for GE

nw-duncan
authored and
smoia
committedNov 29, 2022
Updated integration test for GE

nw-duncan
authored and
smoia
committedNov 29, 2022
Updated io tests

nw-duncan
authored and
smoia
committedNov 29, 2022
Updated utils tests

nw-duncan
authored and
smoia
committedNov 29, 2022
Updated utils tests

nw-duncan
authored and
smoia
committedNov 29, 2022
Cosmetic change in io

nw-duncan
authored and
smoia
committedNov 29, 2022
Updated integration test for GE

nw-duncan
authored and
smoia
committedNov 29, 2022
Updated integration test for GE

nw-duncan
authored and
smoia
committedNov 29, 2022
Create pytest fixtures for downloading different GE files

nw-duncan
authored and
smoia
committedNov 29, 2022
Created test for GE file integration for single input file

nw-duncan
authored and
smoia
committedNov 29, 2022
Created test for GE file integration

nw-duncan
authored and
smoia
committedNov 29, 2022
Created test that ensure load_gep loads the data correctly

nw-duncan
authored and
smoia
committedNov 29, 2022
Created test that ensures check_ge creates files with the .gep suffix

nw-duncan
authored and
smoia
committedNov 29, 2022
Created test that ensures check_ge can catch improperly formatted GE files

nw-duncan
authored and
smoia
committedNov 29, 2022
Altered trigger in load_gep so that it indicates the period in the data where the scan is running (i.e., from 30s into the data to the end)

nw-duncan
authored and
smoia
committedNov 29, 2022
Added catch in check_ge that will detect if a file with a GE-style filename contains data that isn't consistent with GE physiological format. Catches strings and files with more than one column

nw-duncan
authored and
smoia
committedNov 29, 2022
Fixed problem in check_ge where it added .gep to .json and .tsv.gz files that might be produced if phys2bids is run without a heuristics file or no subject id. Also stopped it adding .gep to files …

nw-duncan
authored and
smoia
committedNov 29, 2022
Updated load_gep so that it will add in any extra matching physiological files

nw-duncan
authored and
smoia
committedNov 29, 2022
Updated check_ge so that it looks for other matching GE physiological files and adds the .gep extension to them too

nw-duncan
authored and
smoia
committedNov 29, 2022
Updated check_ge so that it looks for other matching GE physiological files and adds the .gep extension to them too

nw-duncan
authored and
smoia
committedNov 29, 2022
Began altering load_gep so that it loads all physiological files. Searches for other modalities based on the filename the user enters. Need to modify check_ge in io.py before proceeding

nw-duncan
authored and
smoia
committedNov 29, 2022
Minor tidy up

nw-duncan
authored and
smoia
committedNov 29, 2022