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Code for the identification step for CSI-Microbes
Join subcellular Visium HD bins into cells
Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas
《Docker 實戰 6堂課：56個實驗動手做，掌握 Linux 容器核心技術》中的實驗程式碼
ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format.
ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format.
Single-cell RNA-seq analysis from "Single cell transcriptomics reveals spatial and temporal dynamics of gene expression in the developing mouse spinal cord" (2019)
R package for distinguishing cells from background barcodes in droplet-based single-cell RNA-seq data
CytoSPACE: Optimal mapping of scRNA-seq data to spatial transcriptomics data
Analysis and Visualization of Multiple Gene Set Enrichments
Explore the impact of total read count normalization on spatial transcriptomics data
R package (compatible with SCope) to create generic .loom files and extend them with other data e.g.: SCENIC regulons, Seurat clusters and markers, ...
Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
Convert Seurat objects to 10x Genomics Loupe files.
Step-by-Step Guide to Building a PDF-Chat App using LangChain, OpenAI API & Streamlit
😎 A curated list of software and resources for exploring and visualizing (browsing) expression data 😎
User-friendly Desktop Client App for AI Models/LLMs (GPT, Claude, Gemini, Ollama...)
A Systematic and Dynamic Pipeline for Single-Cell RNA Sequencing Analysis
❗ This is a read-only mirror of the CRAN R package repository. TOmicsVis — Transcriptome Visualization Process Scheme. Homepage: https://benben-miao.github.io/TOmicsVis/ Report bugs for this packag…