Structure 28, 1361-1375 (2020)
DOI: 10.1016/j.str.2020.09.009

Web: pechmannlab.net
Contact: [email protected]

structural_classification.py

homology_modelling.py

preparePDB.py

structphylo.py

structaln.py

csu.py

protein_network.py

binding_meme.pyi
binding_motifs.py

rarecodons.py

tradeoff_tree.py

R: ggplot2, reshape2, pROC, viridis, cowplot, , MASS, rpart, ape, ggExtra, matrixStats, ggpubr

Python: numpy, pandas, networkx, subprocess, Biopython, itertools, sklearn, multiprocessing, random, glob, MODELLER, re, shutil, Weblogo

External: superpose, STAMP, DSSP, CSU, MEME