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MACE-OFF23 models

Shell 17 3 Updated Apr 4, 2024

Statistical Rethinking Course for Jan-Mar 2023

R 2,167 248 Updated Nov 28, 2023

pyiron - an integrated development environment (IDE) for computational materials science.

Jupyter Notebook 349 46 Updated Jul 22, 2024

An evaluation framework for machine learning models simulating high-throughput materials discovery.

Python 78 10 Updated Jul 22, 2024

Autodiff is a numerical library for the Go programming language that supports automatic differentiation. It implements routines for linear algebra (vector/matrix operations), numerical optimization…

Go 55 4 Updated Dec 8, 2021

Bayesian analysis of ChIP-Seq data for the identification of transcription factor binding sites.

Mathematica 4 1 Updated Sep 1, 2016

Graph deep learning library for materials

Python 237 58 Updated Jul 21, 2024

Go Thread Pool

Go 19 3 Updated Sep 25, 2023

🔍 A Hex Editor for Reverse Engineers, Programmers and people who value their retinas when working at 3 AM.

C++ 41,485 1,823 Updated Jul 22, 2024
Jupyter Notebook 2 1 Updated May 10, 2023

SchNetPack - Deep Neural Networks for Atomistic Systems

Python 754 210 Updated Jul 22, 2024

Lab materials for MIT 3.320 and Harvard AP 275 courses on atomistic modeling

Python 14 10 Updated Apr 20, 2021

ModHMM Genome Segmentation Method

Go 4 Updated Jan 26, 2023

Go / Golang Bioinformatics Library

Go 40 1 Updated Feb 18, 2024

🌙 LunarVim is an IDE layer for Neovim. Completely free and community driven.

Lua 17,855 1,493 Updated Jul 13, 2024

https://adventofcode.com/

Perl 2 Updated Jan 3, 2024

Mistle is a fast spectral search engine. It uses a fragment-indexing technique and SIMD intrinsics to match experimental MS2 spectra to large spectral libraries at a high performance.

C++ 14 1 Updated Oct 6, 2023

A grammar of graphics for comparative genomics

R 572 64 Updated Jul 18, 2024

Linux/OSX/FreeBSD resource monitor

Shell 10,719 548 Updated Aug 21, 2023

Text Only Genome Viewer!

Java 194 14 Updated Jul 18, 2024

NuTo - yet another finite element library

C++ 17 5 Updated Apr 17, 2019

Location for summaries and analysis of data related to n-CoV 2019, first reported in Wuhan, China

HTML 658 258 Updated Dec 8, 2022
TeX 1 1 Updated Apr 15, 2020

A computation graph micro-framework providing seamless lazy and concurrent evaluation

Python 18 Updated Feb 14, 2020

CRUP collapses different layers of epigenetic information into a single list of regulatory units consisting of dynamically changing enhancers and target genes.

R 4 3 Updated Dec 17, 2020

Accompanying repository for GkmExplain paper

Jupyter Notebook 21 4 Updated Aug 20, 2020

Julia tools for financial network valuation

Jupyter Notebook 2 4 Updated May 19, 2021

Learning gene-specific regulatory elements from epigenetic data

HTML 11 2 Updated Nov 11, 2022

R package implementing the TRAP method to predict transcription factor binding affinity to DNA sequences

R 7 5 Updated Nov 6, 2017
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