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Pull requests list

Drop hd5write.default import
#260 by mschilli87 was merged Mar 31, 2022 Loading… updated Jun 29, 2022
1
Show %variance captured by each principal component
#205 by ArtemSokolov was closed Oct 30, 2021 Loading… updated Oct 30, 2021
4
address #113 - patch bug where TPM bootstrap summary target_ids are moved
#116 by warrenmcg was merged Jun 2, 2017 Loading… updated Mar 4, 2020
2
Update for Bioconductor version 3.9
#227 by sathomas was merged Dec 17, 2019 Loading… updated Dec 17, 2019
1
Miscellaneous bug fixes
#214 by warrenmcg was merged Dec 17, 2019 Loading… updated Dec 17, 2019
1
Emergency patch to fix #190, part 2
#192 by warrenmcg was merged Dec 17, 2019 Loading… updated Dec 17, 2019
Emergency patch to fix #190
#191 by warrenmcg was merged Jun 28, 2018 Loading… updated Jun 28, 2018
1
Improved sanity checks and testing
#182 by warrenmcg was merged Jun 8, 2018 Loading… updated Jun 8, 2018
1
Update write_kallisto_hdf5 function and add ability to subset kallisto object (address #131)
#150 by warrenmcg was merged Mar 12, 2018 Loading… updated Jun 6, 2018
1
Version 0.30.0
#179 by pimentel was merged Jun 6, 2018 Loading… updated Jun 6, 2018
2
sleuth "Advanced options"
#168 by warrenmcg was merged Jun 3, 2018 Loading… updated Jun 3, 2018
2
added link to new walkthrough
#172 by lynnyi was merged Jun 3, 2018 Loading… updated Jun 3, 2018
@pimentel
3
add R documentation back to github site under the manual tab
#170 by warrenmcg was merged May 1, 2018 Loading… updated May 1, 2018
1
Patch: bugs in sleuth_results & other miscellaneous fixes
#163 by warrenmcg was merged Apr 17, 2018 Loading… updated Apr 17, 2018
1
Fix behavior of sleuth_results when gene_mode is TRUE (and error reporting)
#160 by warrenmcg was merged Mar 13, 2018 Loading… updated Mar 13, 2018
1
Shiny and Plot Fixes / Enhancements
#159 by warrenmcg was merged Mar 13, 2018 Loading… updated Mar 13, 2018
1
Quick Patch: UseMethod typo
#157 by warrenmcg was merged Mar 12, 2018 Loading… updated Mar 12, 2018
1
extend sleuth to model TPMs
#145 by warrenmcg was merged Mar 12, 2018 Loading… updated Mar 12, 2018
2 tasks done
1
P-value aggregate
#148 by pimentel was merged Mar 12, 2018 Loading… updated Mar 12, 2018
@lynnyi
9
Improvements to shiny and plot functions (solving several open issues)
#143 by warrenmcg was merged Nov 10, 2017 Loading… updated Nov 10, 2017
1 task done
5
Fixes to various miscellaneous issues (#73, #84, #97, #122, #135, #142)
#144 by warrenmcg was merged Nov 10, 2017 Loading… updated Nov 10, 2017
2
Possible solution to NAs in sleuth_lrt, addressing #68
#118 by warrenmcg was merged Nov 10, 2017 Loading… updated Nov 10, 2017
1
Add missing space in error message
#141 by rakarnik was closed Oct 23, 2017 Loading… updated Oct 23, 2017
1
Update sleuth.R
#92 by Drwhit was closed Oct 18, 2017 Loading… updated Oct 18, 2017
2
Issues #80 and #81: reduce 'mclapply' memory footprint; add "num_cores" option
#94 by warrenmcg was closed Apr 22, 2017 Loading… updated Jun 3, 2017
6
ProTip! Adding no:label will show everything without a label.