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Issues list

Better format for kallisto output feature
#21 by pimentel was closed Apr 7, 2015
1
Test data benchmarks
#4 by nicolasbray was closed Feb 13, 2015
8
small benchmark benchmarks
#6 by pimentel was closed Apr 7, 2015
EM algorithm feature urgent
#7 by pimentel was closed Feb 13, 2015
@pimentel
20
Indexing
#9 by pmelsted was closed Feb 8, 2015
1
Bootstrap samples feature
#11 by pimentel was closed Apr 7, 2015
6
Test accuracy of k-mers and skips benchmarks urgent
#12 by pimentel was closed May 2, 2015
Strandedness
#13 by nicolasbray was closed Feb 9, 2015
1
"Smart skip" feature
#14 by nicolasbray was closed Apr 7, 2015
1
TOLERANCE
#15 by nicolasbray was closed Apr 7, 2015
1
Refactor EM/EM-only in main
#18 by pimentel was closed May 2, 2015
@pimentel
Unique counts feature
#19 by pimentel was closed Jun 27, 2019
4
Index tools feature
#2 by pimentel was closed Feb 6, 2015
@pimentel
5
BAM!
#20 by pmelsted was closed May 2, 2015
12
New intersection rules
#22 by pmelsted was closed May 2, 2015
Bootstrap fails when no reads map bug
#23 by pmelsted was closed Nov 4, 2019
@pimentel
4
Trailing '\001' character bug
#29 by pimentel was closed Apr 6, 2015
1
target_ids in H5 bug
#31 by pimentel was closed Apr 10, 2015
@pimentel
1
Fails to compile on Mac OS Mountain Lion: error: 'unordered_map' file not found
#36 by sjackman was closed May 13, 2015
@pimentel
4
libhdf5.so.7 error with ubuntu binary
#39 by Perugolate was closed May 13, 2015
1
cmake_minimum_required_version
#40 by Perugolate was closed May 13, 2015
1
Test index fails to build - on 32 bit system wontfix
#42 by nstjhp was closed Oct 9, 2015
9
1 column of output for multiple samples
#43 by slowkow was closed May 14, 2015
1
Read BAM files
#46 by sjackman was closed Jun 3, 2015
2
Unable to retrieve spliced/unspliced RNA from single nuclei isolation
#462 by hyjforesight was closed Sep 19, 2024
1
ProTip! Exclude everything labeled bug with -label:bug.