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@OpenBEL Biological Expression Language

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    32 repositories

    • openbel.github.io

      Public
      Biological Expression Language Community Portal
      CSS
      •
      Apache License 2.0
      •3•1•4•2•Updated May 2, 2020May 2, 2020

    • language

      Public
      Specification for the Biological Expression Language
      CSS
      •
      Apache License 2.0
      •4•5•7•0•Updated Jul 21, 2019Jul 21, 2019

    • resource-generator

      Public archive
      Python modules to generate BEL resource documents.
      Python
      •
      Apache License 2.0
      •4•0•21•0•Updated Oct 7, 2017Oct 7, 2017

    • belmgr

      Public archive
      Website for managing BEL Evidences - based on Aurelia. Requires the OpenBEL Platform for the backend API/storage.
      JavaScript
      •
      Apache License 2.0
      •4•2•33•0•Updated Jun 5, 2017Jun 5, 2017

    • bel.rb

      Public archive
      Process BEL (Biological Expression Language) with ruby.
      Ruby
      •
      Apache License 2.0
      •6•8•28•0•Updated May 22, 2017May 22, 2017

    • openbel-api

      Public archive
      RESTful web API for OpenBEL Platform
      Ruby
      •
      Apache License 2.0
      •2•1•27•0•Updated May 22, 2017May 22, 2017

    • bel_parser

      Public archive
      Parser for Biolgical Expression Language.
      Ruby
      •
      Apache License 2.0
      •2•1•15•0•Updated May 22, 2017May 22, 2017

    • openbel-framework-resources

      Public archive
      OpenBEL Resources
      HTML
      •
      Apache License 2.0
      •2•5•4•0•Updated Apr 5, 2017Apr 5, 2017

    • bel.rb-search-sqlite

      Public archive
      A resource search plugin for bel.rb that uses FTS tables in Sqlite3 to search annotation and namespace values.
      Ruby
      •
      Apache License 2.0
      •1•0•0•0•Updated Mar 10, 2017Mar 10, 2017

    • bel.rb-rdf-jena

      Public archive
      Implements an RDF Repository plugin for bel.rb using Apache Jena.
      Ruby
      •
      Apache License 2.0
      •0•0•0•0•Updated Mar 10, 2017Mar 10, 2017

    • openbel-platform

      Public archive
      OpenBEL Platform
      0•2•5•0•Updated Feb 27, 2017Feb 27, 2017

    • openbel-framework

      Public archive
      An open platform for capturing, integrating, storing, and sharing biological knowledge in and across organizations.
      Java
      •
      Apache License 2.0
      •7•22•34•0•Updated Jan 28, 2017Jan 28, 2017

    • resource-reasoner

      Public archive
      Executes forward chaining reasoning over OpenBEL's biological concepts RDF
      Java
      •
      Apache License 2.0
      •0•2•1•0•Updated Oct 24, 2016Oct 24, 2016

    • bel-nav

      Public archive
      BEL Navigator based on OpenBEL Framework 3.0.0 and Cytoscape 3.
      Groovy
      •
      Apache License 2.0
      •0•1•20•0•Updated Jul 5, 2016Jul 5, 2016

    • cla

      Public archive
      Contributor License Agreements
      Apache License 2.0
      •1•1•0•0•Updated Jun 13, 2016Jun 13, 2016

    • devops

      Public archive
      Devops - Vagrant/Ansible configurations to setup dev servers
      HTML
      •
      Apache License 2.0
      •0•0•0•0•Updated May 13, 2016May 13, 2016

    • bel.rb-tsv-translator

      Public archive
      An example bel.rb translator plugin for TAB-separated files.
      Ruby
      •0•0•0•0•Updated Feb 18, 2016Feb 18, 2016

    • converter-reactome_to_bel

      Public archive
      Convert Reactome to BEL
      Python
      •
      Apache License 2.0
      •0•0•13•0•Updated Jan 4, 2016Jan 4, 2016

    • libbel

      Public archive
      C library for parsing BEL Script (includes BEL expressions)
      C
      •
      Apache License 2.0
      •1•0•2•0•Updated Dec 29, 2015Dec 29, 2015

    • tdbstats

      Public archive
      General statistical queries for Jena TDB instances.
      Java
      •0•0•0•0•Updated Nov 3, 2015Nov 3, 2015

    • bel-editor

      Public archive
      NOT MAINTAINED: Enables Eclipse integration with the Bioligical Expression Language (BEL)
      Java
      •
      Apache License 2.0
      •3•5•10•0•Updated Oct 13, 2015Oct 13, 2015

    • bel2rdf

      Public archive
      (OBSOLETE; use OpenBEL/bel.rb)
      Ruby
      •
      Apache License 2.0
      •0•1•1•0•Updated Oct 13, 2015Oct 13, 2015

    • rdf-misc

      Public archive
      Helper scripts to process rdf.
      Shell
      •
      Apache License 2.0
      •0•0•1•0•Updated Oct 13, 2015Oct 13, 2015

    • belhop

      Public archive
      Biological Expression Language (BEL) JavaScript library.
      JavaScript
      •
      Apache License 2.0
      •1•2•4•0•Updated Apr 2, 2015Apr 2, 2015

    • eclipse

      Public archive
      OpenBEL Eclipse repository
      Shell
      •
      Apache License 2.0
      •3•3•0•0•Updated Dec 11, 2014Dec 11, 2014

    • cytoscape-plugins

      Public archive
      The OpenBEL Framework Cytoscape Plugins project enables Cytoscape to access and analyze Knowledge Assembly Models.
      Java
      •
      Apache License 2.0
      •4•6•18•0•Updated Aug 1, 2014Aug 1, 2014

    • openbel-contributions

      Public archive
      A repository for various contributions to the OpenBEL platform.
      Ruby
      •
      Apache License 2.0
      •4•2•0•0•Updated May 14, 2014May 14, 2014

    • rest-api

      Public archive
      BEL Framework REST API
      Java
      •
      Apache License 2.0
      •2•0•3•0•Updated Feb 28, 2014Feb 28, 2014

    • openbel-vim

      Public archive
      Vim plugin for syntax highlighting of BEL Script
      Vim Script
      •
      Apache License 2.0
      •0•1•0•0•Updated Dec 13, 2013Dec 13, 2013

    • openbel-framework-examples

      Public archive
      Examples for the OpenBEL Framework
      Java
      •
      Apache License 2.0
      •1•2•0•0•Updated Aug 27, 2013Aug 27, 2013