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diffusion_classifier_3d Public
Source code associated with the "A Machine Learning Approach to Monitor Three-Dimensional Receptor Trafficking" manuscript
Python MIT License UpdatedNov 14, 2024 -
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FIJI_macros Public
A collection of FIJI (FIJI Is Just ImageJ) macros
ImageJ Macro MIT License UpdatedOct 30, 2024 -
RF_cristae_in_mitos Public
Random Forest Classifier to segment cristae within mitochondria masks in EM images
Jupyter Notebook MIT License UpdatedOct 20, 2024 -
YOLO11_gradio_nuclei Public
Interactive nuclei detection in H&E images using Gradio and YOLO11
Jupyter Notebook MIT License UpdatedOct 18, 2024 -
filament_tortuosity Public
A MATLAB script to analyze Imaris Filament object tortuosity
MATLAB MIT License UpdatedOct 15, 2024 -
DBSCAN_XT_Imaris Public
A custom Imaris XT to run DBSCAN clustering algorithm on a Surfaces object
MATLAB UpdatedOct 14, 2024 -
SMLM_CID Public
Python implementation of a coordinate-based co-localization index to quantify and visualize spatial associations in single-molecule localization microscopy
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