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@oicr-gsi

Genome Sequence Informatics

Repositories for OICR's Genome Sequence Informatics team

Pinned

  1. shesmu shesmu Public

    Decision-driven action launching system

    Java 8 3

  2. djerba djerba Public

    Create cancer bioinformatics reports from metadata and workflow output

    Python 7 2

  3. vidarr vidarr Public

    Analysis provenance tracking server

    Java 1 1

  4. data_release data_release Public

    Scripts for releasing data generated at OICR to stakeholders

    Python

Repositories

Showing 10 of 226 repositories
  • bcl2fastq Public

    Workflow for Illumina's bcl2fastq

    oicr-gsi/bcl2fastq’s past year of commit activity
    C++ 0 1 0 1 Updated Jun 24, 2024
  • pinery-reports Public

    Reports based on data from Pinery

    oicr-gsi/pinery-reports’s past year of commit activity
    Java 0 LGPL-3.0 1 0 2 Updated Jun 24, 2024
  • dimsum Public

    QC Tracking dashboard

    oicr-gsi/dimsum’s past year of commit activity
    Java 1 0 0 3 Updated Jun 24, 2024
  • djerba Public

    Create cancer bioinformatics reports from metadata and workflow output

    oicr-gsi/djerba’s past year of commit activity
    Python 7 GPL-3.0 2 3 2 Updated Jun 21, 2024
  • vidarr Public

    Analysis provenance tracking server

    oicr-gsi/vidarr’s past year of commit activity
    Java 1 MIT 1 0 2 Updated Jun 20, 2024
  • cerberus Public

    File provenance library

    oicr-gsi/cerberus’s past year of commit activity
    Java 0 MIT 0 0 1 Updated Jun 20, 2024
  • pinery Public

    A LIMS abstraction layer to provide generalized LIMS access via a web service.

    oicr-gsi/pinery’s past year of commit activity
    Java 1 GPL-3.0 0 0 2 Updated Jun 20, 2024
  • variantEffectPredictor Public

    Variant Effect Predictor Workflow

    oicr-gsi/variantEffectPredictor’s past year of commit activity
    WDL 3 1 1 2 Updated Jun 20, 2024
  • shesmu Public

    Decision-driven action launching system

    oicr-gsi/shesmu’s past year of commit activity
    Java 8 MIT 3 0 4 Updated Jun 20, 2024
  • nabu Public

    QC tracking for files via a web service

    oicr-gsi/nabu’s past year of commit activity
    JavaScript 0 MIT 0 2 3 Updated Jun 16, 2024
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