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RIKEN
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- https://c-tan.com
- @oinil
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spacemacs Public
Forked from syl20bnr/spacemacsAn Emacs distribution - The best editor is neither Emacs nor Vim, it's Emacs *and* Vim!
Emacs Lisp UpdatedJul 19, 2024 -
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genesis_cg_tool Public
Prepare topology and coordinate file for CG models in Genesis.
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protein_DNA_PWMcos_modeling Public
Some MD files for simulating sequence specific recognition of DNA targets by proteins using the PWMcos model. (produced with CafeMol)
TypeScript MIT License UpdatedMar 12, 2024 -
dired-plus Public
Forked from emacsmirror/dired-plusExtensions to Dired
Emacs Lisp UpdatedJan 3, 2024 -
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handson-ml3 Public
Forked from ageron/handson-ml3A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.
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.tmux Public
Forked from gpakosz/.tmuxOh My Tmux! My pretty + versatile self-contained tmux configuration
MIT License UpdatedFeb 14, 2023 -
my_dict Public
Forked from xxNull-lsk/my_dictδΈζ¬ΎδΈθ±ζθ―ε Έ
Python BSD 3-Clause "New" or "Revised" License UpdatedJan 14, 2023 -
etechou Public
PDF planner with clickable date links created with LaTeX.
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machine-learning-articles Public
Forked from christianversloot/machine-learning-articlesπ§ π¬ Articles I wrote about machine learning, archived from MachineCurve.com.
UpdatedJun 15, 2022 -
alphafold Public
Forked from google-deepmind/alphafoldOpen source code for AlphaFold.
Python Apache License 2.0 UpdatedNov 30, 2021 -
dssp Public
Forked from PDB-REDO/dsspApplication to assign secondary structure to proteins
C++ Other UpdatedOct 1, 2021 -
Oimo.js Public
Forked from lo-th/Oimo.jsLightweight 3d physics engine for javascript
JavaScript MIT License UpdatedJul 8, 2021 -
cgnet Public
Forked from coarse-graining/cgnetlearning coarse-grained force fields
Python BSD 3-Clause "New" or "Revised" License UpdatedMay 21, 2021 -
hilbert3d Public
Just another tool for generating Hilbert space filling curve.
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hmm_tutorials Public
Forked from matsunagalab/tutorial_hmmHands-on tutorials for Markov state modeling of MD and EXP data
Jupyter Notebook MIT License UpdatedMar 8, 2021 -
mldl-md-dynamics Public
Forked from sha256feng/mldl-md-dynamicsA repository of update in molecular dynamics field by recent progress in machine learning and deep learning.
UpdatedFeb 28, 2021 -
genesis-mode Public
Emacs Genesis-mode for user-friendly reading and writing Genesis input files.
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genesis_cg_document Public
Documentation of the CG models used in the MD package GENESIS.
TeX MIT License UpdatedMay 12, 2020 -
eat_tensorflow2_in_30_days Public
Forked from lyhue1991/eat_tensorflow2_in_30_daysTensorflow2.0 ππ is delicious, just eat it! ππ
Python UpdatedApr 1, 2020 -
respac_batch Public
Simple script to perform RESPAC calculations (including APBS) for coarse-grained protein charge distributions.
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genesis_cg_input_python Public
Prepare CG topology and coordinate files for Genesis.
Python MIT License UpdatedOct 18, 2019 -
gen_input_cg_gro Public
Generate 3SPN DNA model files for MD in the format of GRO.
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pynang Public
The python version of PINANG, a stupid project.
Python GNU General Public License v2.0 UpdatedMay 13, 2019 -
symbol-overlay Public
Forked from wolray/symbol-overlayHighlight symbols with keymap-enabled overlays
Emacs Lisp UpdatedMay 6, 2019 -
maxima-jupyter Public
Forked from robert-dodier/maxima-jupyterA Maxima kernel for Jupyter, based on CL-Jupyter (Common Lisp kernel)
Common Lisp Other UpdatedMar 20, 2019 -
practicalAI Public
Forked from GokuMohandas/Made-With-MLπA practical approach to learning and using machine learning.
Jupyter Notebook MIT License UpdatedFeb 13, 2019 -
pinang Public
PINANG is a collection of tools for coarse-grained molecular dynamics.