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Revisions in Response to Peer Review #51

Merged
merged 100 commits into from
Mar 29, 2024
Merged

Revisions in Response to Peer Review #51

merged 100 commits into from
Mar 29, 2024

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jmlondon
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@jmlondon jmlondon commented Mar 28, 2024

Revisions submitted to PeerJ

This pull request represents all of the changes to since the original manuscript was rendered and submitted to PeerJ.

Highlighted Changes

The peer reviews were generally positive and the decision from PeerJ was that the manuscript required minor revisions. In the end, more substantial changes were made to the manuscript in response to the reviews and additional considerations among co-authors.

  • The title of the manuscript was changed to a simpler version that emphasized the focus on this spring season
  • We reorganized much of the text to better follow the convention keeping methods, results, and discussion separate. The initial version tended to blend those sections.
  • We added a figure to provide context for the spatial distribution of bio-logger deployments along with recent aerial survey effort
  • All figures were revised to use more accessible palettes and, generally, to improve clarity and communication
  • Any previous titles or subtitles within the figures were moved to the figure captions. Legends, axis labels, and direct labels were improved to ensure clear communication of key details
  • The supplemental material was expanded to include two additional sections. Section 2 provides plots for each species that show the standard error around the haul-out predictions across the season and at select solar hours. Section 3 explores the use of downward surface solar radiation as a possible replacement for hour-of-day in the model.

this was suggested by reviewer #1.
quite a bit in this commit. really focused on rearranging the location for some of the text, adding deployment location figure, and expanding the discussin re: not including sea ice as a covariate.
there were two deployments ("EB16KKA-110597","PL17SCM-158422") for which the timeline data incorrectly labeled both tags as SPOT. This should fix this issue.
after some updates to telemetry database, a few minor coding improvements, etc. I re-ran the analysis and, initially, had some errors that caused me to realize observations were present outside of the deployment period. Those issues were fixed and, now, models fit without error
updates to some of the case by case filtering of deployments to improve the QAQC of the final dataset.
just testing for now
includes removing the figure title and increasing the ocean basin label font size
add lines, fix ylim, decrease alpha for point-range lines
remove figure titles and include within the figure caption; also adjustments to the legend(s) to provide more detail to reader
@jmlondon jmlondon merged commit bfff790 into main Mar 29, 2024
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