MultiQC config updates.

workflows/rnaseq/assets/multiqc/multiqc_config.yml

@@ -21,7 +21,7 @@ run_modules:
  - star
  - hisat2
  - rsem
- - umi-tools
+ - umitools
  - salmon
  - kallisto
  - samtools
@@ -43,20 +43,25 @@ top_modules:
  - "salmon_deseq2_clustering"
  - "biotype_counts"
  - "dupradar"
+ - "umitools"
 
 module_order:
  - fastqc:
  name: "FastQC (raw)"
+ anchor: "fastqc_raw"
  info: "This section of the report shows FastQC results before adapter trimming."
  path_filters:
- - "./fastqc/raw/*.zip"
+ - "**/raw/*.zip"
  - cutadapt
  - fastp
  - fastqc:
  name: "FastQC (trimmed)"
+ anchor: "fastqc_trimmed"
  info: "This section of the report shows FastQC results after adapter trimming."
  path_filters:
- - "./fastqc/trim/*.zip"
+ - "**/trim/*.zip"
+
+
 
 # Don't show % Dups in the General Stats table (we have this from Picard)
 table_columns_visible: