The output channel of fastq_fastqc_umitools_trimgalore/fastp is calle…

…d 'umi_log' and not 'log'. The meta.yml is wrong.

workflows/rnaseq/main.nf

@@ -162,7 +162,7 @@ workflow RNASEQ {
  ch_filtered_reads = FASTQ_FASTQC_UMITOOLS_TRIMGALORE.out.reads
  ch_trim_read_count = FASTQ_FASTQC_UMITOOLS_TRIMGALORE.out.trim_read_count
  ch_multiqc_files = ch_multiqc_files.mix(FASTQ_FASTQC_UMITOOLS_TRIMGALORE.out.fastqc_zip.collect{it[1]}) // FastQC report - untrimmed
- ch_multiqc_files = ch_multiqc_files.mix(FASTQ_FASTQC_UMITOOLS_TRIMGALORE.out.log.collect{it[1]}) // umi-tools extract logs
+ ch_multiqc_files = ch_multiqc_files.mix(FASTQ_FASTQC_UMITOOLS_TRIMGALORE.out.umi_log.collect{it[1]}) // umi-tools extract logs
  ch_multiqc_files = ch_multiqc_files.mix(FASTQ_FASTQC_UMITOOLS_TRIMGALORE.out.trim_zip.collect{it[1]}) // FastQC report - trimmed
  ch_multiqc_files = ch_multiqc_files.mix(FASTQ_FASTQC_UMITOOLS_TRIMGALORE.out.trim_log.collect{it[1]}) // Trim Galore! trimming report
  ch_versions = ch_versions.mix(FASTQ_FASTQC_UMITOOLS_TRIMGALORE.out.versions)