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Pull requests: nf-core/modules

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Pull requests list

Creating vg call module
#5322 opened Mar 20, 2024 by jenmuell • Draft
7 of 17 tasks
1
1
create ASCAT nf tests and remove pytest Do not merge yet draft nf-test
#5314 opened Mar 20, 2024 by mauro-saporita Loading…
3 of 17 tasks
1
37
Dorothea/differentialabundance Do not merge yet draft
#5266 opened Mar 19, 2024 by Bisho2122 • Draft
6 of 16 tasks
1
@Bisho2122
8
Sigprofilerextractor
#5235 opened Mar 19, 2024 by pawelqs • Draft
17 tasks
13
Subworkflow gatk4_markduplicates
#5201 opened Mar 18, 2024 by shounak1990 Loading…
13 tasks
11
add fastcov module
#5198 opened Mar 18, 2024 by fischer-hub Loading…
13 of 17 tasks
1
24
Added a draft for fasta_ltrretriever_lai new subworkflow Ready for Review
#4984 opened Feb 25, 2024 by GallVp Loading…
8 of 17 tasks
15
gxf2bed
#4951 opened Feb 19, 2024 by edmundmiller • Draft
14 tasks
@edmundmiller
Wave with Docker and Spack
#4940 opened Feb 16, 2024 by edmundmiller • Draft Wave/Seqera Containers Migration
@edmundmiller
9
update hmtnote
#4903 opened Feb 13, 2024 by ramprasadn • Draft
14 tasks
5
Meta Tests
#4899 opened Feb 12, 2024 by edmundmiller • Draft
@edmundmiller
add prefix for first batch
#4857 opened Feb 6, 2024 by FriederikeHanssen • Draft
14 tasks
1
pangolin stub, nf-test, snap container-issue
#4671 opened Dec 30, 2023 by sateeshperi Loading…
5
somatosim
#4666 opened Dec 28, 2023 by stavgrossfeld • Draft
14 tasks
2
Add cobs/query module
#4635 opened Dec 20, 2023 by leoisl Loading…
14 tasks done
9
remove docker.userEmulation from config files
#4626 opened Dec 18, 2023 by mirpedrol Loading…
5
Multiqc integration tests PoC
#4564 opened Dec 10, 2023 by edmundmiller • Draft
@edmundmiller
2
4457 new module chewbaccaallelecall enhancement New feature or request
#4479 opened Nov 28, 2023 by anwarMZ • Draft
6 of 14 tasks
1
1
4451 add vcf2maf nf test nf-test
#4463 opened Nov 28, 2023 by stevekm Loading…
4 of 14 tasks
1
21
Update mageck modules
#4358 opened Nov 20, 2023 by LaurenceKuhl Loading…
3
Allow index format specification in samtools view
#4326 opened Nov 13, 2023 by CharlotteAnne Loading…
1 of 14 tasks
27
ci: One changes job to rule them all
#4284 opened Nov 2, 2023 by edmundmiller • Draft
@edmundmiller
1
add_module_arriba_visualisation new module Adding a new module
#4192 opened Oct 23, 2023 by peterpru Loading…
14 tasks done
@peterpru
18
Add CI to build mulled containers with Wave
#4080 opened Oct 17, 2023 by edmundmiller Loading… Wave/Seqera Containers Migration
1
@edmundmiller
62
2804 new module kmc hackathon2023 Topic for the hackathon of March 2023
#4060 opened Oct 17, 2023 by homonecloco • Draft
14 tasks
1
@homonecloco
1
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