Skip to content

hyppo v0.2.0

Compare
Choose a tag to compare
@sampan501 sampan501 released this 08 Feb 19:38
5780b9d

Note: People with a "+" by their names contributed a patch for the first time.

Release date: 08 February 2021
Supports: Python 3.6+.

New features

  • Added restricted permutation functionality for Dcorr
  • Kernel functions now wrap scikit-learn and support keyword arguments
  • hyppo.ksample.Energy
  • hyppo.ksample.DISCO
  • hyppo.ksample.MMD
  • Fast 1D exact Dcorr O(n log n)
  • hyppo.ksample.Hotelling
  • hyppo.ksample.MANOVA
  • hyppo.independence.MaxMargin

Bug Fixes

  • Fixed error check for k-sample tests to be between samples instead of within
  • Time series doesn't clip negative values
  • Fix docs not building on netlify
  • Fix p-value calculations for permutation tests to be more in line with the literature
  • Fix hyppo.independence.Dcorr and hyppo.independence.Hsic incorrect stats

Documentation

  • Update badges and README to FIRM guidelines
  • Incorrect equation in :meth:hyppo.tools.circle docstring
  • Update README to be in line with scikit-learn
  • Remove literature reference section in docstrings, add links to papers
  • Add docstrings for :mod:hyppo.tools functions
  • Add overview.py file for an overview of the package
  • Add tutorials folder, rewrite so it is more user-friendly (port independence, k-sample, time series)
  • Add examples folder with more information about unique features
  • Move to sphinx-gallery instead of nbconvert
  • Use automodule instead of autoclass
  • Make clear about the package requirements and docs requirements
  • Make changelog into a single file
  • Add external links to neurodata and code of conduct
  • Add citing page to cite the package papers
  • Make index page a clone of README
  • Update MakeFile for more options
  • Add intersphinx mapping with links externally (numpy, scipy, etc.) and internally
  • Add docs for statistic function
  • Add discriminability tutorial

Maintenance

  • Fix typos in warning commits
  • Updated tests to precalculate distance matrix
  • Moved from Travis CI to Circle CI
  • Raise base requirements.txt to fix failing tests on CircleCI
  • Add code coverage config files
  • Add documentation folders and files to .gitignore
  • Remove reps warning test
  • Cache numba after first call to speed up runs
  • Fix netlify config to new doc build structure

Authors

  • Sambit Panda
  • Vivek Gopalakrishnan +
  • Ronak Mehta
  • Ronan Perry +